Yuki Kato

Latest

• Prediction of RNA Joint Secondary Structures Based on Integer Programming
• Prediction of RNA secondary structure including pseudoknots for long sequences
• An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data
• Rtools: a web server for various secondary structural analyses on single RNA sequences
• DAFS: simultaneous aligning and folding of RNA sequences via dual decomposition
• Rtips: fast and accurate tools for RNA 2D structure prediction using integer programming
• Using binding profiles to predict binding sites of target RNAs
• IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming
• RactIP: fast and accurate prediction of RNA-RNA interaction using integer programming