Sato Laboratory (Biomedical Data Science)
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RNA-RNA Interaction
A web server for designing molecular switches composed of two interacting RNAs
The programmability of RNA-RNA interactions through intermolecular base-pairing has been successfully exploited to design a variety of …
Akito Taneda
,
Kengo Sato
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DOI
An accessibility-incorporated method for accurate prediction of RNA-RNA interactions from sequence data
MOTIVATION: RNA-RNA interactions via base pairing play a vital role in the post-transcriptional regulation of gene expression. …
Yuki Kato
,
Tomoya Mori
,
Kengo Sato
,
Shingo Maegawa
,
Hiroshi Hosokawa
,
Tatsuya Akutsu
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DOI
Rtips: fast and accurate tools for RNA 2D structure prediction using integer programming
We present a web-based tool set Rtips for fast and accurate prediction of RNA 2D complex structures. Rtips comprises two computational …
Yuki Kato
,
Kengo Sato
,
Kiyoshi Asai
,
Tatsuya Akutsu
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DOI
RactIP: fast and accurate prediction of RNA-RNA interaction using integer programming
MOTIVATION: Considerable attention has been focused on predicting RNA-RNA interaction since it is a key to identifying possible targets …
Yuki Kato
,
Kengo Sato
,
Michiaki Hamada
,
Yoshihide Watanabe
,
Kiyoshi Asai
,
Tatsuya Akutsu
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